Top-Down Analysis of Temporal Hierarchy in Biochemical Reaction Networks

نویسندگان
چکیده

برای دانلود باید عضویت طلایی داشته باشید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Top-Down Analysis of Temporal Hierarchy in Biochemical Reaction Networks

The study of dynamic functions of large-scale biological networks has intensified in recent years. A critical component in developing an understanding of such dynamics involves the study of their hierarchical organization. We investigate the temporal hierarchy in biochemical reaction networks focusing on: (1) the elucidation of the existence of "pools" (i.e., aggregate variables) formed from co...

متن کامل

Distributed Top-Down Hierarchy Construction

Hierarchies provide scalability in large networks and are integral to many widely-used protocols and applications. Previous approaches to constructing hierarchies have typically either assumed static hierarchy configuration, or have used bottom-up construction methods. We describe how to construct hierarchies in a top-down fashion, and show that our method is much more efficient than bottom-up ...

متن کامل

Numerical modeling for nonlinear biochemical reaction networks

Nowadays, numerical models have great importance in every field of science, especially for solving the nonlinear differential equations, partial differential equations, biochemical reactions, etc. The total time evolution of the reactant concentrations in the basic enzyme-substrate reaction is simulated by the Runge-Kutta of order four (RK4) and by nonstandard finite difference (NSFD) method. A...

متن کامل

Title: Emergence, Hierarchy, and Top-down Causation in Evolutionary Biology

General rights This document is made available in accordance with publisher policies. Please cite only the published version using the reference above. Full terms of use are available: Summary The concept of emergence and the related notion of 'downward causation' have arisen in numerous branches of science, and have also been extensively discussed in philosophy. Here I examine emergence and do...

متن کامل

Emergence, hierarchy and top-down causation in evolutionary biology.

The concept of emergence and the related notion of 'downward causation' have arisen in numerous branches of science, and have also been extensively discussed in philosophy. Here, I examine emergence and downward causation in relation to evolutionary biology. I focus on the old, but ongoing discussion in evolutionary biology over the 'levels of selection' question: which level(s) of the biologic...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: PLoS Computational Biology

سال: 2008

ISSN: 1553-7358

DOI: 10.1371/journal.pcbi.1000177